Mapped reads for uncultivated Hydrogenobaculum bacterium UBA8840 geno... - SRA

SRX3576359: Mapped reads for uncultivated Hydrogenobaculum bacterium UBA8840 genome recovered from SRX200676
1 ILLUMINA (Illumina HiSeq 2000) run: 731,057 spots, 139.1M bases, 43.5Mb downloads

Design: Reads from SRX200676 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8840 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Hydrogenobaculum bacterium UBA8840 genome recovered from SRX200676

SAMN08019841 • SRS2846241 • All experiments • All runs

Organism: Hydrogenobaculum sp.

Library:

Name: UBA8840_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 731,057 spots, 139.1M bases, 43.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR6486538	731,057	139.1M	43.5Mb	2018-02-23

ID:: 4961861

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Sequence Read Archive

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